Basic Information
Locus ID:
nbisL1-mrna-7610
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 22694265 | 22714705 | + | nbisL1-mrna-7610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 194,985.59 Da | 37.01 | 101.05 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 154 | 262 | 8.99813E-5 | - |
| Pfam | PF00931 | NB-ARC domain | 136 | 370 | 2.1E-44 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 443 | 840 | 1.56E-33 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 126 | 384 | 1.19E-43 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 935 | 1564 | 4.42E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 475 | 855 | 1.5E-30 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 121 | 282 | 6.5E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1058 | 1313 | 1.5E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 856 | 1057 | 1.2E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1323 | 1581 | 3.1E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 283 | 372 | 2.5E-16 | IPR042197 |
| SMART | SM00382 | AAA_5 | 147 | 286 | 1.1E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 592 | 608 | 3.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 223 | 237 | 3.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 315 | 329 | 3.0E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 150 | 165 | 3.0E-19 | - |
| Coils | Coil | Coil | 1 | 28 | - | - |
| Coils | Coil | Coil | 1660 | 1694 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_034930023.1 | - | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology