Basic Information
Locus ID:
nbisL1-mrna-7555
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6024452 | 6027561 | - | nbisL1-mrna-7555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 53,348.58 Da | 50.81 | 55.98 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 267 | 350 | 1.5E-24 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 485 | - | - |
| Coils | Coil | Coil | 282 | 312 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021657085.1 | protein WVD2-like 4 isoform X7 [Hevea brasiliensis] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LLJ2 | Uncharacterized protein LOC105138210 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology