Basic Information
Locus ID:
nbisL1-mrna-7508
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000106F_pilon | 4431852 | 4442354 | - | nbisL1-mrna-7508 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 73,973.98 Da | 44.35 | 77.86 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06609 | STKc_MST3_like | 14 | 287 | 1.2032E-177 | - |
| Pfam | PF00069 | Protein kinase domain | 16 | 267 | 2.6E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 299 | 6.88E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 299 | 1.9E-98 | - |
| SMART | SM00220 | serkin_6 | 15 | 267 | 1.0E-94 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 267 | 51.806068 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 44 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 381 | - | - |
| Coils | Coil | Coil | 41 | 68 | - | - |
| Coils | Coil | Coil | 618 | 638 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15220.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021667294.1 | germinal center kinase 1 isoform X6 [Hevea brasiliensis] | 0 |
| Q9Y6E0 | Serine/threonine-protein kinase 24 OS=Homo sapiens OX=9606 GN=STK24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LCZ3 | Uncharacterized protein MANES_03G106600 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg19484 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_12478 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah008020 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g086810 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg19259, Sbi_jg37676, Sbi_jg37681, Sbi_jg37683 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5512 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00006829 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl23221, Sgl28287 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000011816, gene:ENSEOMG00000029145 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0019300, CQ.Regalona.r1.4BG0019640 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30161650 |
| Apiaceae | Apium graveolens | 2 | Ag11G03155, Ag2G00236 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G012300, scaffold003358G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103707176, gene-LOC103721937 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1147.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri3G17104, Ftri4G27080 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G53165.3, AT3G15220.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011332m.g.v1.0, Thhalv10022019m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g39720.v2.2, Sp3g13430.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g049840.2N, BniB06g027620.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1057 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1230 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno13g01520 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0105s00021.v1.0, Dusal.0105s00022.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g22680 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 3 | nbisL1-mrna-9212, nbisL1-mrna-9219, nbisL1-mrna-9223 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1569 |
| Plantaginaceae | Plantago ovata | 4 | Pov_00031301, Pov_00031303, Pov_00031306, Pov_00031307 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G32310 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.3104, BH03.3289, CH03.3475 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0568540, gene-QOZ80_7BG0599880 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0142660.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_041101, gene-QYE76_041188 |
| Poaceae | Oryza coarctata | 2 | Oco13G008190, Oco14G008660 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g32400.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G294700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304153 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr19G005910, Chr24G008180, Chr27G011400, Chr28G007500 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G420500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG030300, gene_TRIDC2BG033980 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G233400.1, TraesCS2B02G249900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb322360_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38356 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5207 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.740, evm.TU.LG09.1912 |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc02g07290, gene.Posoc10g03600, gene.Posoc10g06260 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.205 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21825 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7995 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7508 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.131 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017764 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-6757 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12545, nbisL1-mrna-21717 |
| Salicaceae | Populus euphratica | 2 | populus_peu00548, populus_peu17608 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132620429 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107026486 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7709 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G0185 |
| Zosteraceae | Zostera marina | 1 | Zosma03g22990.v3.1 |