Basic Information
Locus ID:
nbisL1-mrna-7493
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 42558740 | 42566975 | + | nbisL1-mrna-7493 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 216,588.52 Da | 52.25 | 73.49 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 444 | 787 | 5.12425E-112 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1627 | 1890 | 5.63608E-147 | IPR044769 |
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 44 | 110 | 5.32324E-30 | - |
| Pfam | PF01363 | FYVE zinc finger | 45 | 113 | 3.7E-18 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 594 | 776 | 1.7E-25 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1666 | 1832 | 1.7E-33 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1610 | 1890 | 1.31E-79 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 43 | 113 | 8.63E-20 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 596 | 753 | 2.88E-39 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1603 | 1747 | 9.4E-36 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 594 | 753 | 3.4E-46 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1749 | 1891 | 4.4E-42 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 36 | 116 | 1.6E-22 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1601 | 1891 | 8.1E-119 | IPR002498 |
| SMART | SM00064 | fyve_4 | 40 | 115 | 5.7E-20 | IPR000306 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1561 | 1890 | 57.049343 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 48 | 114 | 12.86789 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 960 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 842 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 823 | 842 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1902 | 1922 | - | - |
| Coils | Coil | Coil | 1221 | 1241 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_039038385.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Hibiscus syriacus] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2X4M3 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112217pilonHSYRG00054 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology