Basic Information
Locus ID:
nbisL1-mrna-7490
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Phosphatidylinositol 4-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 21400435 | 21404419 | + | nbisL1-mrna-7490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 65,848.87 Da | 39.99 | 90.07 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 112 | 180 | 1.37831E-8 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 277 | 531 | 2.3E-55 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 112 | 183 | 9.2E-8 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 36 | 106 | 1.0E-15 | IPR000626 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 418 | 586 | 2.96E-8 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 106 | 182 | 1.68E-11 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 30 | 107 | 1.38E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 110 | 184 | 6.9E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 13 | 108 | 9.6E-14 | - |
| SMART | SM00213 | ubq_7 | 34 | 105 | 6.0E-8 | IPR000626 |
| SMART | SM00213 | ubq_7 | 110 | 182 | 0.54 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 110 | 186 | 12.465626 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 34 | 105 | 14.077005 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24240.1 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein. | 0 |
| RefSeq | XP_021604965.1 | phosphatidylinositol 4-kinase gamma 3 [Manihot esculenta] | 0 |
| Q9FNF8 | Phosphatidylinositol 4-kinase gamma 3 OS=Arabidopsis thaliana OX=3702 GN=PI4KG3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2J3Z3 | 1-phosphatidylinositol 4-kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology