Basic Information
Locus ID:
nbisL1-mrna-7483
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 42184899 | 42189143 | - | nbisL1-mrna-7483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 90,454.40 Da | 47.76 | 80.25 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 7 | 148 | 2.02605E-45 | - |
| Pfam | PF00582 | Universal stress protein family | 9 | 123 | 5.4E-8 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 437 | 691 | 2.3E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 691 | 1.2E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 9 | 124 | 6.11E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 506 | 1.8E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 507 | 719 | 2.0E-50 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 8 | 145 | 2.0E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 434 | 695 | 4.1E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 695 | 35.523701 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 440 | 461 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 552 | 564 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 812 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 812 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 290 | - | - |
| Coils | Coil | Coil | 307 | 327 | - | - |
| Coils | Coil | Coil | 338 | 411 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_040948043.1 | U-box domain-containing protein 34-like [Gossypium hirsutum] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8J6DC45 | Protein kinase domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_004565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology