Basic Information
Locus ID:
nbisL1-mrna-7468
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 41741001 | 41750014 | - | nbisL1-mrna-7468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 56,360.78 Da | 50.85 | 77.22 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 335 | 360 | 0.19 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 39 | 497 | 1.83E-30 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 83 | 502 | 1.4E-23 | IPR015943 |
| SMART | SM00320 | WD40_4 | 113 | 153 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 322 | 360 | 59.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 31 | 66 | 4.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 364 | 418 | 450.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 263 | 303 | 190.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 10 | 504 | 2.5E-175 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 113 | 127 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 280 | 308 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 252 | 279 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 365 | 390 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 309 | 336 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 473 | 502 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 391 | 417 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 337 | 364 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 45 | 65 | 1.2E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 224 | 251 | 1.2E-119 | IPR000009 |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_039070806.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Hibiscus syriacus] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2X5Z4 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116994pilonHSYRG00022 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology