Basic Information
Locus ID:
nbisL1-mrna-7449
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 20903471 | 20924386 | - | nbisL1-mrna-7449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 352,285.88 Da | 46.45 | 102.51 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 160 | 316 | 6.24694E-4 | - |
| Pfam | PF00931 | NB-ARC domain | 167 | 413 | 1.0E-32 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 2808 | 3045 | 1.33E-13 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2389 | 2637 | 2.12E-17 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1725 | 2001 | 7.85E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 934 | 1324 | 3.4E-14 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 486 | 881 | 4.53E-25 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 149 | 427 | 2.58E-43 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 2128 | 2373 | 1.41E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1467 | 1708 | 1.65E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 515 | 922 | 3.5E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2017 | 2261 | 1.2E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1193 | 1538 | 5.7E-7 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 328 | 4.9E-28 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 331 | 416 | 1.3E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 923 | 1088 | 3.9E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1089 | 1188 | 7.9E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1545 | 1806 | 6.0E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2267 | 2544 | 2.3E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1807 | 2016 | 1.8E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2856 | 3050 | 5.0E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2545 | 2781 | 8.4E-13 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 634 | 650 | 4.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 363 | 377 | 4.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 4.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 253 | 267 | 4.2E-19 | - |
| Coils | Coil | Coil | 36 | 98 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_043809784.1 | - | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | B9REY6 | Phosphoprotein phosphatase, putative OS=Ricinus communis OX=3988 GN=RCOM_1429720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology