Basic Information
Locus ID:
nbisL1-mrna-7403
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Phosphatidylinositol 4-kinase gamma
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000106F_pilon | 3713652 | 3714624 | + | nbisL1-mrna-7403 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 32,775.39 Da | 36.99 | 95.73 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 34 | 95 | 1.4E-10 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 32 | 96 | 2.99E-10 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 30 | 110 | 6.5E-10 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 25 | 94 | 10.266311 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 295 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.3 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_021611829.1 | phosphatidylinositol 4-kinase gamma 4 [Manihot esculenta] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JFP2 | 1-phosphatidylinositol 4-kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology