Basic Information
Locus ID:
nbisL1-mrna-7389
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Glycogen synthase kinase-3 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001820F_pilon | 3813446 | 3817694 | + | nbisL1-mrna-7389 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 48,310.74 Da | 36.05 | 95.11 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14137 | STKc_GSK3 | 68 | 374 | 0.0 | IPR039192 |
| Pfam | PF00069 | Protein kinase domain | 73 | 371 | 6.6E-61 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 398 | 5.93E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 415 | 4.1E-77 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 152 | 1.0E-35 | - |
| SMART | SM00220 | serkin_6 | 73 | 371 | 1.2E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 371 | 42.802711 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 103 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04550 (Signaling pathways regulating pluripotency of stem cells)
map04550 (Signaling pathways regulating pluripotency of stem cells)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
ko04711 (Circadian rhythm - fly)
map04711 (Circadian rhythm - fly)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26751.1 | shaggy-related kinase 11. encodes a SHAGGY-related kinase involved in meristem organization. | 0 |
| RefSeq | XP_007051227.1 | PREDICTED: shaggy-related protein kinase alpha [Theobroma cacao] | 0 |
| P43288 | Shaggy-related protein kinase alpha OS=Arabidopsis thaliana OX=3702 GN=ASK1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2P2KPM2 | non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology