Basic Information
Locus ID:
nbisL1-mrna-7387
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 20249780 | 20259213 | - | nbisL1-mrna-7387 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 104,528.25 Da | 33.43 | 90.86 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 643 | 909 | 2.22614E-100 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 641 | 904 | 9.1E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 399 | 5.78E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 623 | 915 | 6.97E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 608 | 712 | 8.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 379 | 7.8E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 181 | 1.0E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 713 | 928 | 1.1E-58 | - |
| SMART | SM00220 | serkin_6 | 637 | 906 | 1.0E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 637 | 910 | 39.368149 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 643 | 665 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 757 | 769 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021592399.1 | leucine-rich repeat receptor protein kinase HPCA1 isoform X2 [Manihot esculenta] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JI79 | Uncharacterized protein MANES_14G162000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology