Basic Information
Locus ID:
nbisL1-mrna-7349
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 1602561 | 1605118 | - | nbisL1-mrna-7349 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 63,285.22 Da | 44.22 | 100.64 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 38 | 73 | 5.1E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 36 | 92 | 1.16E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 170 | 348 | 1.41E-9 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 77 | 1.7E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 133 | 382 | 1.6E-11 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_006427013.1 | F-box/LRR-repeat protein At4g14103 isoform X2 [Citrus clementina] | 0 |
| TrEMBL | A0A2P2LVU6 | F-box domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology