Basic Information
Locus ID:
nbisL1-mrna-7346
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000106F_pilon | 3222096 | 3225448 | - | nbisL1-mrna-7346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 52,249.92 Da | 39.31 | 98.47 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 166 | 431 | 2.8551E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 163 | 431 | 1.1E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 138 | 431 | 1.31E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 135 | 235 | 1.6E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 236 | 448 | 1.4E-61 | - |
| SMART | SM00220 | serkin_6 | 160 | 429 | 4.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 160 | 438 | 36.696823 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 166 | 188 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 282 | 294 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 130 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021612656.1 | probable serine/threonine-protein kinase At1g01540 [Manihot esculenta] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9WNX9 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G253500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology