halophFGD

Basic Information

Locus ID: nbisL1-mrna-7334

Species & Taxonomic ID: Carallia pectinifolia & 98586

Genome Assembly: GCA_037832335.1

Description: Cysteine-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr03	19237513	19239461	-	nbisL1-mrna-7334

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.81	15,437.15 Da	29.82	81.05	-0.24

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	71	141	2.39E-8	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	55	143	9.7E-16	-

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G23750.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_002324686.4	receptor-like kinase TMK4 [Populus trichocarpa]
Swiss-Prot	Q9LK43	Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1
TrEMBL	A0A836AWE6	-

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg31913
Poaceae	Lolium multiflorum	2	gene-QYE76_067803, gene-QYE76_071318
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-7334