Basic Information
Locus ID:
nbisL1-mrna-7330
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 36354014 | 36357475 | - | nbisL1-mrna-7330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 58,483.02 Da | 39.58 | 71.58 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 138 | 449 | 6.74958E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 351 | 446 | 2.4E-5 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 136 | 319 | 7.8E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 116 | 455 | 2.86E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 218 | 471 | 5.1E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 107 | 217 | 2.0E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 132 | 452 | 36.612019 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 138 | 170 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 261 | 273 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01300.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_016753253.1 | probable serine/threonine-protein kinase PIX7 isoform X1 [Gossypium hirsutum] | 0 |
| Q9SRH7 | Serine/threonine-protein kinase PBL35 OS=Arabidopsis thaliana OX=3702 GN=PBL35 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5X5T6 | Protein kinase domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G384000v1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology