Basic Information
Locus ID:
nbisL1-mrna-73
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001172F_pilon | 404177 | 418401 | + | nbisL1-mrna-73 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 132,939.80 Da | 53.05 | 76.74 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 203 | 320 | 2.0E-15 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 588 | 901 | 2.1E-82 | IPR001752 |
| Pfam | PF14571 | Stress-induced protein Di19, C-terminal | 106 | 201 | 7.2E-29 | IPR027935 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 205 | 335 | 1.17E-23 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 582 | 938 | 9.07E-98 | IPR027417 |
| Gene3D | G3DSA:1.10.418.10 | - | 192 | 321 | 5.5E-28 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 577 | 944 | 1.6E-108 | IPR036961 |
| SMART | SM00033 | ch_5 | 202 | 319 | 5.9E-11 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 580 | 910 | 2.5E-127 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 200 | 321 | 18.45755 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 582 | 902 | 91.755173 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 805 | 816 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 656 | 677 | 4.1E-26 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 806 | 824 | 4.1E-26 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 775 | 792 | 4.1E-26 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1105 | 1202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1006 | 1026 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 949 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 952 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1162 | 1176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1112 | 1136 | - | - |
| Coils | Coil | Coil | 909 | 936 | - | - |
| Coils | Coil | Coil | 562 | 582 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27000.1 | kinesin 4. Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. | 0 |
| RefSeq | XP_034912939.1 | kinesin-like protein KIN-14G [Populus alba] | 0 |
| O81635 | Kinesin-like protein KIN-14G OS=Arabidopsis thaliana OX=3702 GN=KIN14G PE=1 SV=2 | 0 | |
| TrEMBL | A0A6M2ESV8 | Kinesin-4 OS=Populus davidiana OX=266767 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology