Basic Information
Locus ID:
nbisL1-mrna-7279
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000106F_pilon | 2648440 | 2651695 | + | nbisL1-mrna-7279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 111,362.47 Da | 33.10 | 101.82 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 1.3E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 104 | 162 | 4.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 176 | 234 | 5.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 595 | 7.5E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 716 | 984 | 1.7E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 313 | 4.76E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 712 | 988 | 3.83E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 260 | 601 | 6.67E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 797 | 1012 | 5.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 388 | 1.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 712 | 796 | 6.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 190 | 4.8E-44 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 286 | 8.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 389 | 631 | 8.9E-70 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 8.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 125 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 581 | 330.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 712 | 988 | 8.9E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 438 | 463 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 1013 | 38.873459 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 718 | 742 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 297 | 310 | 7.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 558 | 571 | 7.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1022 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_002301848.1 | MDIS1-interacting receptor like kinase 1 [Populus trichocarpa] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | B9GRD1 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G256500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology