Basic Information
Locus ID:
nbisL1-mrna-7279
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 18046441 | 18055300 | - | nbisL1-mrna-7279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 127,109.62 Da | 36.45 | 106.11 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 299 | 415 | 1.6E-13 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 172 | 281 | 1.6E-19 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 488 | 1082 | 1.59E-33 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 152 | 429 | 6.0E-45 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 149 | 326 | 8.0E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 513 | 682 | 2.5E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 901 | 1092 | 1.6E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 332 | 418 | 2.9E-17 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 683 | 899 | 1.9E-8 | IPR032675 |
| SMART | SM00382 | AAA_5 | 177 | 336 | 0.005 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 7.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 365 | 379 | 7.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 637 | 653 | 7.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 253 | 267 | 7.1E-20 | - |
| Coils | Coil | Coil | 43 | 77 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_025013768.2 | uncharacterized protein LOC8266842 isoform X3 [Ricinus communis] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology