Basic Information
Locus ID:
nbisL1-mrna-7263
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
phosphatidylinositol 3- and 4-kinase family protein ubiquitin family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001820F_pilon | 2976953 | 2978895 | + | nbisL1-mrna-7263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 66,837.73 Da | 36.13 | 89.28 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 112 | 182 | 1.33774E-5 | - |
| Pfam | PF00240 | Ubiquitin family | 112 | 185 | 1.5E-7 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 283 | 521 | 6.2E-55 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 45 | 106 | 2.6E-13 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 108 | 186 | 4.14E-10 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 408 | 574 | 3.98E-10 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 36 | 107 | 1.84E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 33 | 106 | 1.6E-12 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 111 | 199 | 8.8E-9 | - |
| SMART | SM00213 | ubq_7 | 110 | 184 | 0.063 | IPR000626 |
| SMART | SM00213 | ubq_7 | 34 | 105 | 0.015 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 32 | 105 | 13.097113 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 112 | 169 | 9.569498 | IPR000626 |
| Coils | Coil | Coil | 132 | 152 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_002320202.4 | phosphatidylinositol 4-kinase gamma 4 [Populus trichocarpa] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JFP2 | 1-phosphatidylinositol 4-kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology