Basic Information
Locus ID:
nbisL1-mrna-7231
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001820F_pilon | 2751439 | 2755734 | - | nbisL1-mrna-7231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 61,947.51 Da | 47.76 | 79.11 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 143 | 221 | 1.10213E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 147 | 236 | 2.7E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 261 | 354 | 7.3E-10 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 235 | 3.22E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 139 | 261 | 1.8E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 270 | 376 | 3.4E-14 | - |
| SMART | SM00875 | BACK_2 | 253 | 355 | 2.2E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 114 | 238 | 5.3E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 143 | 207 | 12.515656 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_021653309.1 | BTB/POZ domain-containing protein POB1 [Hevea brasiliensis] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2L958 | Atpob1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology