Basic Information
Locus ID:
nbisL1-mrna-7221
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 17279593 | 17283997 | + | nbisL1-mrna-7221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 63,211.77 Da | 45.00 | 76.40 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 384 | 443 | 4.8E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 346 | 447 | 2.37E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 360 | 496 | 7.7E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 192 | 503 | 8.499495 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 200 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70450.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020534005.1 | - | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067L914 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg1471 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30168650 |
| Apiaceae | Apium graveolens | 4 | Ag10G02206, Ag11G04546, Ag2G00801, Ag9G01854 |
| Arecaceae | Cocos nucifera | 1 | scaffold000460G000040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103697818 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.288.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri15G18457, Ftri17G12801, Ftri6G19474 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0955 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0954 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000158 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.210 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-28373, nbisL1-mrna-7221 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13228 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-7688, nbisL1-mrna-7689, nbisL1-mrna-7690 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000023l.272 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018787 |
| Salicaceae | Populus euphratica | 2 | populus_peu04171, populus_peu12000 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644359 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107025325 |