Basic Information
Locus ID:
nbisL1-mrna-7193
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 1782574 | 1795383 | - | nbisL1-mrna-7193 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 56,252.07 Da | 58.11 | 58.14 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 251 | 307 | 3.5E-23 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 424 | 481 | 1.6E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 248 | 308 | 1.31E-23 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 415 | 483 | 2.62E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 235 | 309 | 3.8E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 408 | 484 | 5.2E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 250 | 308 | 1.5E-31 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 423 | 482 | 1.8E-36 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 245 | 309 | 21.046169 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 418 | 483 | 36.448841 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 392 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021651262.1 | probable WRKY transcription factor 3 isoform X1 [Hevea brasiliensis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9VWJ7 | WRKY transcription factor 3 OS=Manihot esculenta OX=3983 GN=MANES_05G106900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology