Basic Information
Locus ID:
nbisL1-mrna-7155
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000106F_pilon | 1623033 | 1626292 | - | nbisL1-mrna-7155 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 70,151.98 Da | 41.99 | 104.78 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 506 | 9.6E-14 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 145 | 204 | 1.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 9.1E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 218 | 239 | 0.48 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 513 | 5.48E-21 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 240 | 1.02E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 183 | 5.8E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 253 | 1.9E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 488 | 9.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 644 | 11.835118 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 416 | 438 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 301 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021668550.1 | LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X1 [Hevea brasiliensis] | 0 |
| O04086 | Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana OX=3702 GN=At1g11050 PE=2 SV=1 | 0 | |
| TrEMBL | A0A140G4L4 | LRR-RLK OS=Vernicia montana OX=316732 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology