Basic Information
Locus ID:
nbisL1-mrna-7125
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 2475382 | 2480785 | - | nbisL1-mrna-7125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 57,969.75 Da | 56.36 | 80.33 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 144 | 8.0E-61 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 220 | 361 | 3.0E-74 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 225 | 365 | 1.05E-25 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 7 | 147 | 3.14E-19 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 144 | 3.2E-13 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 228 | 347 | 6.0E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 419 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_022725266.1 | uncharacterized protein LOC111281823 isoform X1 [Durio zibethinus] | 0 |
| TrEMBL | A0A2P2JPF7 | Uncharacterized protein LOC105116278 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology