Basic Information
Locus ID:
nbisL1-mrna-7065
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 15443073 | 15445506 | - | nbisL1-mrna-7065 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 75,640.41 Da | 49.55 | 88.34 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 70 | 131 | 1.1E-10 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 231 | 455 | 1.09E-11 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 61 | 117 | 2.0E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 449 | 6.4E-10 | IPR032675 |
| Coils | Coil | Coil | 140 | 160 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58900.3 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021681775.1 | F-box/LRR-repeat protein At2g42730-like isoform X1 [Hevea brasiliensis] | 0 |
| Q93ZX6 | F-box/LRR-repeat protein At3g58900 OS=Arabidopsis thaliana OX=3702 GN=At3g58900 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6NBI6 | F-box domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_035945 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology