Basic Information
Locus ID:
nbisL1-mrna-7060
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 15416410 | 15418786 | - | nbisL1-mrna-7060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 61,483.53 Da | 50.26 | 102.74 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 49 | 8.5E-10 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 152 | 311 | 4.32E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 65 | 7.19E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 47 | 5.1E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 124 | 465 | 2.9E-8 | IPR032675 |
| SMART | SM00256 | fbox_2 | 14 | 54 | 1.3E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 58 | 9.629941 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13985.1 | FBD-associated F-box protein. | 0 |
| RefSeq | XP_021692286.1 | putative F-box/LRR-repeat protein At5g02700 [Hevea brasiliensis] | 0 |
| Q4PSI6 | FBD-associated F-box protein At4g13985 OS=Arabidopsis thaliana OX=3702 GN=At4g13985 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P9EYU6 | F-box/LRR-repeat protein At3g03360-like OS=Juglans regia OX=51240 GN=LOC109018596 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology