Basic Information
Locus ID:
nbisL1-mrna-7
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 87185 | 89342 | - | nbisL1-mrna-7 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 68,169.80 Da | 40.05 | 94.67 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 119 | 180 | 2.5E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 193 | 211 | 1.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 69 | 1.4E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 343 | 607 | 8.5E-32 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 212 | 6.8E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 611 | 1.2E-50 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 235 | 2.3E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 414 | 7.4E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 617 | 6.6E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 190 | 1.4E-36 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 339 | 613 | 28.103352 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 317 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07040.1 | Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | 0 |
| RefSeq | XP_039071849.1 | pollen receptor-like kinase 2 [Hibiscus syriacus] | 0 |
| Q84JQ4 | Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3CLT1 | Pollen receptor-like kinase 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00003194pilonHSYRG00020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology