Basic Information
Locus ID:
nbisL1-mrna-6971
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001820F_pilon | 1026951 | 1032959 | - | nbisL1-mrna-6971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 77,703.23 Da | 39.17 | 83.96 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 367 | 663 | 7.05614E-116 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 336 | 648 | 1.3E-94 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 367 | 673 | 1.07E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 369 | 668 | 3.7E-43 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 163 | - | - |
| Coils | Coil | Coil | 239 | 266 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_021654502.1 | polygalacturonate 4-alpha-galacturonosyltransferase-like [Hevea brasiliensis] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LGZ5 | Hexosyltransferase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology