Basic Information
Locus ID:
nbisL1-mrna-693
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
IAA7
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 4120975 | 4122986 | + | nbisL1-mrna-693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 27,509.22 Da | 36.74 | 70.44 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 15 | 239 | 1.2E-84 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 130 | 229 | 2.35E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 125 | 242 | 5.6E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 130 | 232 | 23.318312 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 43 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.1 | indole-3-acetic acid inducible 14. IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. | 0 |
| RefSeq | XP_021593241.1 | auxin-responsive protein IAA14 [Manihot esculenta] | 0 |
| Q38832 | Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2JY23 | Auxin-responsive protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology