HalophFGD

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Basic Information
Locus ID: nbisL1-mrna-6901
Species & Taxonomic ID: Ceriops zippeliana & 413951
Genome Assembly: GCA_037897445.1
Description: mechanosensitive ion channel activity
Maps and Mapping Data
Chromosome Start End Strand ID
000063F_pilon 4621242 4625168 - nbisL1-mrna-6901
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.37 22,251.76 Da 53.44 94.90 -0.40
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K17535 (serine/threonine-protein kinase TNNI3K [EC:2.7.11.1])
Best hit
Source Best Hit ID Description E-value
TAIR AT4G38470.3 - 0
RefSeq XP_050211547.1 serine/threonine-protein kinase STY46-like isoform X3 [Mercurialis annua] 0
Swiss-Prot F4JTP5 Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 0
TrEMBL V4SL73 Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000919mg PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg11701, jg23009, jg26123, jg855
Aizoaceae Mesembryanthemum crystallinum 2 gene_21928, gene_23644
Amaranthaceae Atriplex hortensis 2 Ah009613, Ah012672
Amaranthaceae Beta vulgaris 2 BVRB_6g152560, BVRB_9g213400
Amaranthaceae Salicornia bigelovii 4 Sbi_jg12286, Sbi_jg42379, Sbi_jg44960, Sbi_jg47272
Amaranthaceae Salicornia europaea 2 Seu_jg21540, Seu_jg27178
Amaranthaceae Suaeda aralocaspica 2 GOSA_00002312, GOSA_00018843
Amaranthaceae Suaeda glauca 5 Sgl31891, Sgl37169, Sgl37235, Sgl55518, Sgl60737
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000002031, gene:ENSEOMG00000003941 ...
gene:ENSEOMG00000019814, gene:ENSEOMG00000027751, gene:ENSEOMG00000039110, gene:ENSEOMG00000052192
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.6AG0008040, CQ.Regalona.r1.6BG0009000 ...
CQ.Regalona.r1.7BG0002420, CQ.Regalona.r1.9AG0022240
Anacardiaceae Pistacia vera 3 pistato.v30048850, pistato.v30211670, pistato.v30277570
Apiaceae Apium graveolens 3 Ag3G02552, Ag6G02383, Ag7G01791
Arecaceae Cocos nucifera 2 COCNU_08G009150, COCNU_09G004840
Arecaceae Phoenix dactylifera 3 gene-LOC103701060, gene-LOC103708687, gene-LOC103722908
Asparagaceae Asparagus officinalis 2 AsparagusV1_01.1114.V1.1, AsparagusV1_07.2397.V1.1
Asteraceae Flaveria trinervia 5 Ftri13G32896, Ftri18G15319, Ftri18G29776, Ftri4G02625 ...
Ftri5G04777
Brassicaceae Arabidopsis thaliana 3 AT2G17700.1, AT4G35780.1, AT4G38470.1
Brassicaceae Eutrema salsugineum 3 Thhalv10022635m.g.v1.0, Thhalv10024738m.g.v1.0 ...
Thhalv10024820m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp3g31090.v2.2, Sp7g33540.v2.2, Sp7g37310.v2.2
Brassicaceae Brassica nigra 6 BniB02g014020.2N, BniB03g013310.2N, BniB03g015800.2N ...
BniB03g065790.2N, BniB04g026130.2N, BniB05g000860.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq03G0815, Ceq06G0097, Ceq07G1776
Casuarinaceae Casuarina glauca 3 Cgl03G0895, Cgl06G0107, Cgl07G1923
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno09g00760, gene.Cymno10g07940, gene.Cymno11g10700
Dunaliellaceae Dunaliella salina 1 Dusal.1229s00001.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate02g12640, gene.Thate05g02030, gene.Thate08g17620
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-5643
Nitrariaceae Nitraria sibirica 2 evm.TU.LG02.2831, evm.TU.LG08.359
Plantaginaceae Plantago ovata 2 Pov_00001725, Pov_00036963
Plumbaginaceae Limonium bicolor 3 Lb1G06109, Lb3G17284, Lb3G17286
Poaceae Echinochloa crus-galli 11 AH03.2795, AH03.2963, AH07.90, BH03.2947, BH06.2792 ...
BH07.204, BH07.205, CH03.3148, CH03.3329, CH03.4667, Contig181.218
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_2AG0099520, gene-QOZ80_2BG0152940 ...
gene-QOZ80_6AG0527620, gene-QOZ80_6AG0551200, gene-QOZ80_6BG0481530, gene-QOZ80_6BG0504780, gene-QOZ80_7AG0566900, gene-QOZ80_7BG0598310
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0501600.1, HORVU.MOREX.r3.6HG0549970.1
Poaceae Lolium multiflorum 3 gene-QYE76_007335, gene-QYE76_019755, gene-QYE76_041394
Poaceae Oryza coarctata 7 Oco03G000990, Oco04G000910, Oco12G017750, Oco13G007120 ...
Oco14G007690, Oco17G010920, Oco18G010840
Poaceae Oryza sativa 4 LOC_Os02g02780.1, LOC_Os06g50920.1, LOC_Os07g29330.1 ...
LOC_Os09g37230.1
Poaceae Paspalum vaginatum 5 gene-BS78_02G261100, gene-BS78_02G261200 ...
gene-BS78_02G276000, gene-BS78_04G014800, gene-BS78_10G259900
Poaceae Puccinellia tenuiflora 4 Pt_Chr0207057, Pt_Chr0306610, Pt_Chr0306613, Pt_Chr0701125
Poaceae Sporobolus alterniflorus 13 Chr05G000300, Chr06G035920, Chr0G004450, Chr0G027130 ...
Chr10G014620, Chr11G007620, Chr14G009750, Chr15G027090, Chr19G006200, Chr21G009880, Chr24G005230, Chr27G010650, Chr28G004440
Poaceae Thinopyrum elongatum 3 Tel2E01G442400, Tel5E01G535800, Tel6E01G168400
Poaceae Triticum dicoccoides 4 gene_TRIDC5AG049770, gene_TRIDC5BG053430 ...
gene_TRIDC6AG008850, gene_TRIDC6BG013260
Poaceae Triticum aestivum 6 TraesCS5A02G338800.1, TraesCS5B02G337300.1 ...
TraesCS5D02G343000.1, TraesCS6A02G071900.1, TraesCS6B02G096400.1, TraesCS6D02G070000.1
Poaceae Zea mays 4 Zm00001eb104040_P001, Zm00001eb230270_P001 ...
Zm00001eb319970_P003, Zm00001eb321250_P002
Poaceae Zoysia japonica 3 nbis-gene-35176, nbis-gene-52354, nbis-gene-9534
Poaceae Zoysia macrostachya 4 Zma_g29969, Zma_g31163, Zma_g32145, Zma_g5125
Portulacaceae Portulaca oleracea 4 evm.TU.LG02.1780, evm.TU.LG07.1982, evm.TU.LG09.152 ...
evm.TU.LG15.1159
Posidoniaceae Posidonia oceanica 4 gene.Posoc06g14500, gene.Posoc06g16960, gene.Posoc08g03360 ...
gene.Posoc08g05330
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_2_RagTag.56, evm.TU.Scaffold_6_RagTag.2160 ...
evm.TU.Scaffold_7_RagTag.397
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-16973, nbisL1-mrna-18877, nbisL1-mrna-5149 ...
nbisL1-mrna-5215
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-10976, nbisL1-mrna-13387, nbisL1-mrna-14891
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-11670, nbisL1-mrna-6901, nbisL1-mrna-9319
Rhizophoraceae Kandelia candel 3 evm.TU.utg000002l.814, evm.TU.utg000009l.1203 ...
evm.TU.utg000011l.1327
Rhizophoraceae Kandelia obovata 3 Maker00005810, Maker00007184, Maker00010669
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-14102, nbisL1-mrna-15702, nbisL1-mrna-8775
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-20092, nbisL1-mrna-21186, nbisL1-mrna-24112 ...
nbisL1-mrna-2955
Salicaceae Populus euphratica 5 populus_peu08660, populus_peu14066, populus_peu15423 ...
populus_peu33064, populus_peu36692
Solanaceae Lycium barbarum 5 gene-LOC132599359, gene-LOC132604167, gene-LOC132606664 ...
gene-LOC132622086, gene-LOC132624902
Solanaceae Solanum chilense 4 SOLCI000015600, SOLCI003460400, SOLCI003721200 ...
SOLCI003818900
Solanaceae Solanum pennellii 4 gene-LOC107002556, gene-LOC107006677, gene-LOC107008519 ...
gene-LOC107011222
Tamaricaceae Reaumuria soongarica 3 STRG.20750_chr08_-, gene_2340, gene_7950
Tamaricaceae Tamarix chinensis 3 TC04G1115, TC10G0180, TC12G0808
Zosteraceae Zostera marina 2 Zosma05g23820.v3.1, Zosma06g11590.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.