Basic Information
Locus ID:
nbisL1-mrna-6872
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
aspartic-type endopeptidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001820F_pilon | 302039 | 303304 | - | nbisL1-mrna-6872 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 45,814.41 Da | 43.45 | 86.18 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 91 | 418 | 2.86385E-81 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 91 | 252 | 4.3E-47 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 276 | 414 | 1.9E-20 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 83 | 418 | 5.2E-75 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 69 | 252 | 5.9E-44 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 254 | 421 | 5.3E-39 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 91 | 414 | 34.528416 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 299 | 310 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_017618741.1 | PREDICTED: aspartic proteinase CDR1-like [Gossypium arboreum] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KLY9 | Eukaryotic aspartyl protease family protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology