Basic Information
Locus ID:
nbisL1-mrna-6848
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2497000 | 2500129 | + | nbisL1-mrna-6848 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 73,760.98 Da | 39.14 | 100.69 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 304 | 339 | 6.96968E-4 | - |
| Pfam | PF13855 | Leucine rich repeat | 74 | 132 | 1.0E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 677 | 8.4E-33 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 145 | 204 | 2.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 4.0E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 240 | 9.72E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 677 | 2.2E-48 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 179 | 9.0E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 180 | 253 | 5.9E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 682 | 2.6E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 488 | 3.6E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 680 | 24.626387 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021668550.1 | LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X1 [Hevea brasiliensis] | 0 |
| Q9SKG5 | Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=SERK4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A140G4N2 | LRR-RLK OS=Vernicia montana OX=316732 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology