Basic Information
Locus ID:
nbisL1-mrna-6848
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17712411 | 17715732 | + | nbisL1-mrna-6848 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 73,460.30 Da | 33.37 | 88.49 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 331 | 596 | 9.70616E-87 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 166 | 245 | 3.8E-9 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 326 | 593 | 6.3E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 61 | 133 | 1.6E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 309 | 627 | 2.97E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 285 | 400 | 4.7E-31 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 248 | 6.8E-11 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 41 | 135 | 9.1E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 401 | 603 | 8.8E-59 | - |
| SMART | SM00220 | serkin_6 | 325 | 570 | 2.2E-30 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 248 | 13.918054 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 35 | 135 | 14.397815 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 325 | 576 | 37.092575 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 331 | 353 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 447 | 459 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 641 | 661 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_017628717.1 | PREDICTED: cysteine-rich receptor-like protein kinase 42 isoform X1 [Gossypium arboreum] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J5V741 | Cysteine-rich receptor-like protein kinase 42 OS=Gossypium barbadense OX=3634 GN=ES319_A07G240700v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology