Basic Information
Locus ID:
nbisL1-mrna-6777
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1624801 | 1626748 | - | nbisL1-mrna-6777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.37 | 30,949.76 Da | 59.92 | 70.42 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 241 | 284 | 6.91213E-19 | - |
| Pfam | PF19026 | HYPK UBA domain | 246 | 284 | 4.0E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 138 | 193 | 2.2E-21 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 144 | 197 | 1.0E-30 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 246 | 283 | 3.9E-19 | - |
| SMART | SM01407 | NAC_2 | 138 | 194 | 3.3E-24 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 135 | 200 | 17.478951 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 94 | - | - |
| Coils | Coil | Coil | 96 | 116 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_012080590.1 | nascent polypeptide-associated complex subunit alpha-like protein 2 [Jatropha curcas] | 0 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2MEA3 | Uncharacterized protein MANES_01G043900 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology