Basic Information
Locus ID:
nbisL1-mrna-6756
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002085F_pilon | 4860016 | 4861520 | - | nbisL1-mrna-6756 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 31,011.30 Da | 47.47 | 84.31 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 101 | 215 | 6.59E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 79 | 253 | 6.2E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 274 | 10.789203 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 58 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15730.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_043805278.1 | probable inactive receptor kinase At3g08680 [Manihot esculenta] | 0 |
| Q9LFV3 | Calcium/calmodulin-regulated receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRLK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6L914 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30134570 |
| Apiaceae | Apium graveolens | 1 | Ag8G00589 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_06.774.V1.1, AsparagusV1_06.877.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G14097, Ftri7G01338 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028446 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_16_RagTag.89 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-22335 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4375 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20395 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000022l.444 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3582 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-6756 |
| Salicaceae | Populus euphratica | 1 | populus_peu34525 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132637065 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114078458 |