Basic Information
Locus ID:
nbisL1-mrna-6736
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000063F_pilon | 3526282 | 3534898 | + | nbisL1-mrna-6736 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 109,744.31 Da | 51.41 | 81.29 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 707 | 955 | 3.83304E-128 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 296 | 504 | 2.7E-75 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 703 | 955 | 2.8E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 954 | 1.13E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 780 | 966 | 1.3E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 694 | 778 | 2.3E-35 | - |
| SMART | SM00220 | serkin_6 | 701 | 959 | 7.0E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 701 | 959 | 43.269135 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 707 | 728 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 926 | 948 | 9.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 816 | 834 | 9.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 775 | 788 | 9.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 882 | 904 | 9.6E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 73 | - | - |
| Coils | Coil | Coil | 218 | 256 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.2 | - | 0 |
| RefSeq | XP_024449952.1 | serine/threonine-protein kinase CTR1 [Populus trichocarpa] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | B9GN95 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G111200 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology