Basic Information
Locus ID:
nbisL1-mrna-6726
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 12021147 | 12033040 | - | nbisL1-mrna-6726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 209,075.02 Da | 49.16 | 79.21 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 32 | 99 | 3.74698E-30 | - |
| CDD | cd03334 | Fab1_TCP | 391 | 712 | 8.23023E-111 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1587 | 1850 | 2.63052E-148 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1626 | 1792 | 2.1E-33 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 102 | 1.1E-16 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 483 | 708 | 1.0E-23 | IPR002423 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 32 | 105 | 7.67E-19 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 483 | 649 | 9.16E-37 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1585 | 1850 | 2.16E-80 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 481 | 650 | 5.3E-48 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1710 | 1851 | 2.8E-42 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 106 | 2.3E-20 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1563 | 1707 | 9.7E-35 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1560 | 1851 | 9.4E-124 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 1.6E-18 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 13.033864 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1516 | 1850 | 58.009125 | IPR002498 |
| Coils | Coil | Coil | 1148 | 1175 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021639412.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | B9T3Y2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology