Basic Information
Locus ID:
nbisL1-mrna-671
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 5808912 | 5814746 | + | nbisL1-mrna-671 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 71,172.12 Da | 49.42 | 80.61 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 182 | 444 | 9.30135E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 183 | 445 | 1.5E-69 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 473 | 627 | 7.38E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 180 | 469 | 2.02E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 470 | 624 | 4.8E-18 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 463 | 554 | 4.8E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 176 | 271 | 5.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 272 | 456 | 2.1E-59 | - |
| SMART | SM00220 | serkin_6 | 183 | 445 | 3.5E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 183 | 445 | 51.721264 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 307 | 319 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 189 | 215 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_012079194.1 | CDPK-related kinase 5 [Jatropha curcas] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L933 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology