Basic Information
Locus ID:
nbisL1-mrna-6686
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002085F_pilon | 4405973 | 4413776 | + | nbisL1-mrna-6686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.39 | 148,014.56 Da | 49.84 | 87.95 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10017 | B3_DNA | 1193 | 1305 | 7.84854E-14 | IPR003340 |
| Pfam | PF00225 | Kinesin motor domain | 452 | 744 | 3.9E-88 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 12 | 106 | 3.6E-6 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 11 | 108 | 1.57E-12 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 412 | 784 | 2.8E-104 | IPR027417 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 1192 | 1305 | 2.43E-12 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 1195 | 1312 | 1.3E-20 | IPR015300 |
| Gene3D | G3DSA:1.10.418.10 | - | 8 | 113 | 7.7E-12 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 407 | 788 | 5.3E-111 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 410 | 754 | 3.9E-135 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 8 | 111 | 14.285109 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 412 | 746 | 91.978439 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 646 | 657 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 616 | 633 | 1.0E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 647 | 665 | 1.0E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 696 | 717 | 1.0E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 479 | 500 | 1.0E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 976 | 998 | - | - |
| Coils | Coil | Coil | 760 | 790 | - | - |
| Coils | Coil | Coil | 233 | 253 | - | - |
| Coils | Coil | Coil | 201 | 221 | - | - |
| Coils | Coil | Coil | 286 | 313 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_024446862.2 | kinesin-like protein KIN-14J isoform X2 [Populus trichocarpa] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JHT8 | Uncharacterized protein MANES_02G021900 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology