Basic Information
Locus ID:
nbisL1-mrna-6648
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 265911 | 271216 | - | nbisL1-mrna-6648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 145,068.58 Da | 43.30 | 75.52 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1030 | 1287 | 9.26758E-109 | - |
| CDD | cd06410 | PB1_UP2 | 188 | 286 | 3.93791E-43 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1026 | 1287 | 3.6E-60 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 202 | 286 | 1.2E-16 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1013 | 1287 | 5.88E-75 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 200 | 292 | 1.81E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 203 | 288 | 1.2E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1011 | 1110 | 2.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1111 | 1305 | 1.0E-51 | - |
| SMART | SM00666 | PB1_new | 199 | 288 | 3.4E-25 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1024 | 1290 | 2.7E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1024 | 1289 | 40.343395 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1030 | 1051 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1149 | 1161 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1143 | 1161 | 8.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1106 | 1119 | 8.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1258 | 1280 | 8.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1214 | 1236 | 8.5E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 609 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021639805.1 | uncharacterized protein LOC110634958 [Hevea brasiliensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JWA4 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology