Basic Information
Locus ID:
nbisL1-mrna-6629
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 82105 | 84383 | - | nbisL1-mrna-6629 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 62,244.71 Da | 40.70 | 72.80 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 167 | 519 | 8.43157E-177 | - |
| Pfam | PF00069 | Protein kinase domain | 395 | 498 | 1.1E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 170 | 320 | 3.9E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 159 | 522 | 3.5E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 253 | 321 | 2.3E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 516 | 1.7E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 517 | 526 | 1.7E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 167 | 252 | 2.3E-49 | - |
| SMART | SM00220 | serkin_6 | 169 | 498 | 1.8E-87 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 169 | 498 | 44.498791 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 290 | 302 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 119 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12690.1 | AGC kinase 1.5. Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes. | 0 |
| RefSeq | XP_002527210.2 | serine/threonine-protein kinase AGC1-7 isoform X2 [Ricinus communis] | 0 |
| Q9LTW5 | Serine/threonine-protein kinase AGC1-5 OS=Arabidopsis thaliana OX=3702 GN=AGC1-5 PE=1 SV=1 | 0 | |
| TrEMBL | B9SMJ1 | Serine/threonine protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_0988670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg21737, jg24716 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7969 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034039 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g036150 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20705, Sbi_jg23055 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16922 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009260 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl62102, Sgl66661 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000017127, gene:ENSEOMG00000018480 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0012150, CQ.Regalona.r1.2BG0013650 |
| Apiaceae | Apium graveolens | 2 | Ag10G02965, Ag4G01971 |
| Arecaceae | Cocos nucifera | 3 | COCNU_03G011560, COCNU_06G005210, COCNU_14G003450 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103702589, gene-LOC103709514, gene-LOC113460934 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1680.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri18G04759, Ftri1G13164 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT1G16440.1, AT1G79250.1, AT3G12690.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10007415m.g.v1.0, Thhalv10019858m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp1g14590.v2.2, Sp3g10850.v2.2, Sp5g34330.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB01g052400.2N, BniB06g041740.2N, BniB07g056140.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1708 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1826 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno03g00260 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g14220 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2996 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00006151, Pov_00039182 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G31048 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.69, AH05.564, AH07.1261, AH07.1277, AH07.1291, BH02.59 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0109560, gene-QOZ80_2BG0163110 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0033710.1, HORVU.MOREX.r3.3HG0249430.1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_010466, gene-QYE76_022244, gene-QYE76_051598 |
| Poaceae | Oryza coarctata | 5 | Oco01G005990, Oco02G006060, Oco04G008170, Oco09G004990 ... |
| Poaceae | Oryza sativa | 4 | LOC_Os01g13270.1, LOC_Os02g18430.1, LOC_Os05g14750.1 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_03G004600, gene-BS78_04G122600, gene-BS78_K190600 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0201904, Pt_Chr0204845, Pt_Chr0501444 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G010900, Chr12G026010, Chr18G004910 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G238500, Tel3E01G281600, Tel5E01G712000 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC1AG019150, gene_TRIDC1BG024360 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS1A02G133200.1, TraesCS1B02G152700.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb119120_P001, Zm00001eb236860_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-17909, nbis-gene-50985 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12589, Zma_g27900 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG04.837, evm.TU.LG05.2097, evm.TU.LG07.125 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g02570 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_5_RagTag.8, evm.TU.Scaffold_9_RagTag.5 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-10360, nbisL1-mrna-22204 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-19136, nbisL1-mrna-4096 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-10744, nbisL1-mrna-7675 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000003l.4, evm.TU.utg000006l.5 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00012991, Maker00017629 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-6629, nbisL1-mrna-9339 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21553 |
| Salicaceae | Populus euphratica | 2 | populus_peu06662, populus_peu20551 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132638529 |
| Solanaceae | Solanum chilense | 1 | SOLCI002817100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107006822 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4857 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G3593 |
| Zosteraceae | Zostera marina | 1 | Zosma01g16930.v3.1 |