Basic Information
Locus ID:
nbisL1-mrna-6624
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
S-type anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002085F_pilon | 4047029 | 4049754 | - | nbisL1-mrna-6624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 64,114.46 Da | 47.08 | 90.48 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 195 | 489 | 3.73833E-96 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 196 | 500 | 1.0E-46 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 192 | 510 | 2.3E-67 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 567 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_007040040.2 | PREDICTED: guard cell S-type anion channel SLAC1 [Theobroma cacao] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835NB37 | Uncharacterized protein OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf01G0090900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology