Basic Information
Locus ID:
nbisL1-mrna-6558
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 10623532 | 10629249 | - | nbisL1-mrna-6558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 92,406.83 Da | 37.85 | 88.97 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 583 | 671 | 1.6E-15 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 66 | 6.7E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 328 | 1.19E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 565 | 786 | 3.05E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 800 | 2.5E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 554 | 655 | 5.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 190 | 3.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 261 | 1.4E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 348 | 6.7E-9 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 245 | 267 | 7.21911 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 580 | 847 | 13.898683 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 586 | 608 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 810 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011012973.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X3 [Populus euphratica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A837A7P1 | Leucine-rich repeat transmembrane protein OS=Salix suchowensis OX=1278906 GN=IMY05_004G0176800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology