Basic Information
Locus ID:
nbisL1-mrna-6555
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
methyltransferase DDB_G0268948
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000065F_pilon | 5376901 | 5378713 | + | nbisL1-mrna-6555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 29,155.22 Da | 32.34 | 95.96 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02440 | AdoMet_MTases | 38 | 138 | 1.21409E-9 | - |
| Pfam | PF08241 | Methyltransferase domain | 39 | 134 | 2.4E-9 | IPR013216 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 4 | 171 | 2.89E-20 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 5 | 257 | 4.4E-43 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10830.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. | 0 |
| RefSeq | XP_021274585.1 | putative methyltransferase DDB_G0268948 [Herrania umbratica] | 0 |
| Q55EX9 | Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0268948 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J9JAM8 | Methyltransf_11 domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goarm_015935 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology