Basic Information
Locus ID:
nbisL1-mrna-6547
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 10547025 | 10548950 | - | nbisL1-mrna-6547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 43,692.18 Da | 32.36 | 89.31 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 73 | 1.7E-11 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 130 | 266 | 4.1E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 388 | 7.15E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 266 | 5.5E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 130 | 140 | 5.5E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 80 | 1.0E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 285 | 390 | 1.1E-22 | - |
| SMART | SM00220 | serkin_6 | 4 | 383 | 1.9E-73 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 383 | 40.159653 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 185 | 197 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 118 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38620.2 | cyclin-dependent kinase B1;2. Encodes a member of a plant specific family of cyclin dependent kinases. | 0 |
| RefSeq | XP_012090971.1 | cell division control protein 2 homolog C [Jatropha curcas] | 0 |
| Q2V419 | Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana OX=3702 GN=CDKB1-2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067JD95 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_00608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology