Basic Information
Locus ID:
nbisL1-mrna-6463
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000065F_pilon | 4156948 | 4166178 | - | nbisL1-mrna-6463 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 81,252.52 Da | 37.62 | 89.55 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 374 | 415 | 4.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 64 | 99 | 1.6E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 318 | 353 | 0.0021 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 77 | 426 | 1.87E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 558 | 601 | 2.41E-5 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 314 | 1.3E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 315 | 440 | 1.5E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 541 | 659 | 7.8E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 62 | 122 | 1.4E-5 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 2.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 148 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 378 | 402 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 271 | 302 | 300.0 | IPR003591 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 717 | 736 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 717 | 750 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_012086448.1 | receptor protein kinase TMK1 [Jatropha curcas] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KI38 | Putative receptor protein kinase TMK1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology