Basic Information
Locus ID:
nbisL1-mrna-6409
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Inactive leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 9407380 | 9410928 | - | nbisL1-mrna-6409 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 80,312.19 Da | 35.68 | 95.20 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 360 | 726 | 2.8E-23 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 1.1E-12 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 123 | 140 | 1.7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 148 | 166 | 0.5 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 726 | 5.4E-48 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 237 | 3.34E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 240 | 1.1E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 173 | 1.3E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 438 | 2.8E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 734 | 2.1E-39 | - |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 7.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 32.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 734 | 27.283579 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57830.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012073038.1 | receptor protein kinase-like protein ZAR1 [Jatropha curcas] | 0 |
| Q9ZU46 | Receptor protein kinase-like protein ZAR1 OS=Arabidopsis thaliana OX=3702 GN=ZAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067KQU7 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_06817 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg15944, jg31304 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19077 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah021676 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g060860 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59241, Sbi_jg63391 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23503 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00018430, GOSA_00018431 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl23754 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000014768, gene:ENSEOMG00000045526 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0020310, CQ.Regalona.r1.3BG0021130 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30187190 |
| Apiaceae | Apium graveolens | 1 | Ag3G01452 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G011960, COCNU_11G006930 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103696643, gene-LOC103711381 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1216.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri12G28952 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G42290.1, AT3G57830.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10005826m.g.v1.0, Thhalv10017834m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g24460.v2.2, Sp5g04870.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g003540.2N, BniB08g072590.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1116 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1285 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g05790 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g20430 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-8460 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2426 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006923 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G16282 |
| Poaceae | Echinochloa crus-galli | 2 | AH08.2014, BH08.2115 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0636570, gene-QOZ80_8BG0665210 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0679600.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_029981 |
| Poaceae | Oryza coarctata | 2 | Oco15G011360, Oco16G011220 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g39590.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G183900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0100741 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr16G016920, Chr17G016290, Chr20G000520, Chr29G002560 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G433100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG031430, gene_TRIDC7BG023090 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G245400.1, TraesCS7B02G146100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb034900_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-17390, nbis-gene-55097 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g23222, Zma_g24335 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.529, evm.TU.LG15.415 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g10640 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1215 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6409 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4432 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4218 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.776 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017006 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7489 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13407 |
| Salicaceae | Populus euphratica | 2 | populus_peu11010, populus_peu26147 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132634227 |
| Solanaceae | Solanum chilense | 1 | SOLCI006458900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012663 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4073 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G2399 |
| Zosteraceae | Zostera marina | 1 | Zosma03g07670.v3.1 |