Basic Information
Locus ID:
nbisL1-mrna-6387
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000065F_pilon | 3623724 | 3628401 | + | nbisL1-mrna-6387 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 94,499.05 Da | 43.89 | 92.55 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 611 | - | - |
| Coils | Coil | Coil | 327 | 382 | - | - |
| Coils | Coil | Coil | 299 | 319 | - | - |
| Coils | Coil | Coil | 528 | 548 | - | - |
| Coils | Coil | Coil | 626 | 646 | - | - |
| Coils | Coil | Coil | 447 | 502 | - | - |
| Coils | Coil | Coil | 567 | 587 | - | - |
| Coils | Coil | Coil | 691 | 756 | - | - |
| Coils | Coil | Coil | 391 | 411 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.1 | phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_037494827.1 | kinesin-like protein KIN-12C [Jatropha curcas] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W9P8 | Girdin OS=Manihot esculenta OX=3983 GN=MANES_03G210500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology