Basic Information
Locus ID:
nbisL1-mrna-6370
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11463597 | 11466724 | + | nbisL1-mrna-6370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 43,028.86 Da | 30.30 | 80.83 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 86 | 357 | 3.19025E-112 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 81 | 357 | 1.8E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 357 | 6.15E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 369 | 2.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 163 | 1.7E-20 | - |
| SMART | SM00220 | serkin_6 | 80 | 360 | 3.0E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 80 | 360 | 40.583675 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 224 | 236 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 180 | 193 | 6.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 218 | 236 | 6.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 328 | 350 | 6.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 284 | 306 | 6.4E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034924392.1 | serine/threonine-protein kinase STY13-like [Populus alba] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KMJ0 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology