Basic Information
Locus ID:
nbisL1-mrna-6370
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12763509 | 12765936 | - | nbisL1-mrna-6370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 85,398.66 Da | 29.47 | 103.87 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 498 | 558 | 7.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 187 | 245 | 2.7E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 451 | 470 | 1.3 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 725 | 791 | 3.1E-6 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 87 | 6.1E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 724 | 792 | 2.05E-12 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 383 | 633 | 8.84E-56 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 94 | 400 | 2.35E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 298 | 2.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 641 | 7.7E-77 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 716 | 794 | 9.4E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 202 | 1.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 379 | 1.3E-21 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 113 | 136 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 449 | 473 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 353 | 377 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 233 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 305 | 329 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 521 | 545 | 300.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 723 | 794 | 11.538304 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 729 | 753 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_039030845.1 | MDIS1-interacting receptor like kinase 1-like [Hibiscus syriacus] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3CQ83 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002919pilonHSYRG00259 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology